Protein ZmTRAF22
ZmTRAF22 is a protein in the TRAF family.
Information
Coreg Name: ZmTRAF22
Species: Maize
Coreg Family: TRAF
Gene Name(Synonym): MAB11
Uniprot ID: A0A1D6PDQ1

Protein ZmTRAF22

ZmTRAF22 is a protein in the TRAF family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
PF00651PF00917
Zm00001eb049070_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d033082DAPseq no logo sequence fimo position
Zm00001d033082DAPseq no logo sequence fimo position
Zm00001d033082ChIPseq no logo sequence fimo position
Zm00001d033082PChIPseq no logo sequence fimo position

Interactions where ZmTRAF22 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmTRAF22 is the target  
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There are 39 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb049070_T001 from maize genome v5

Amino Acid Sequence
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MAIISPNTGLIAASFAVSPSTFPRRRFVPKPYSLQNAAAPKLKSVNRAPRRRENSNSAGLVRNRRGAAERWSEREIEIIR
FAMSSRAGGGKPLWSASTIVAKVASGYHILRIDGYSRTMETPTGESIASLPFSVGGRCWRIRYYPNGDKLENKEYISLYL
NLHDRSVEAEKAQLMFRFVGDVAEQPLILGRLHTFEKQGWGYAKFIKRKDLEESKHLVDDSFSIRCDVAVRFNDVRVEKA
PEAAAAAAMISVQPSDLHQHLGSLLLTQKGADVVFDVAGETFAAHRCVLAARSPVFTAELFGAMKEGHTGGVVRIEDMEP
RAFKALLYFLYTDLLFPKTMATTMNQSEDGDVGGDDEDVLCQHLLVAADKYNLERLKSLCEKKLSECIHVGTVAIILTLA
EQHRCPGLKKVCLHFLRSPANLRAVASSDAFKHLSSSCPSVMVELVAMLGNSA

MAIISPNTGLIAASFAVSPSTFPRRRFVPKPYSLQNAAAPKLKSVNRAPRRRENSNSAGLVRNRRGAAERWSEREIEIIR
FAMSSRAGGGKPLWSASTIVAKVASGYHILRIDGYSRTMETPTGESIASLPFSVGGRCWRIRYYPNGDKLENKEYISLYL
NLHDRSVEAEKAQLMFRFVGDVAEQPLILGRLHTFEKQGWGYAKFIKRKDLEESKHLVDDSFSIRCDVAVRFNDVRVEKA
PEAAAAAAMISVQPSDLHQHLGSLLLTQKGADVVFDVAGETFAAHRCVLAARSPVFTAELFGAMKEGHTGGVVRIEDMEP
RAFKALLYFLYTDLLFPKTMATTMNQSEDGDVGGDDEDVLCQHLLVAADKYNLERLKSLCEKKLSECIHVGTVAIILTLA
EQHRCPGLKKVCLHFLRSPANLRAVASSDAFKHLSSSCPSVMVELVAMLGNSA

MAIISPNTGLIAASFAVSPSTFPRRRFVPKPYSLQNAAAPKLKSVNRAPRRRENSNSAGLVRNRRGAAERWSEREIEIIR
FAMSSRAGGGKPLWSASTIVAKVASGYHILRIDGYSRTMETPTGESIASLPFSVGGRCWRIRYYPNGDKLENKEYISLYL
NLHDRSVEAEKAQLMFRFVGDVAEQPLILGRLHTFEKQGWGYAKFIKRKDLEESKHLVDDSFSIRCDVAVRFNDVRVEKA
PEAAAAAAMISVQPSDLHQHLGSLLLTQKGADVVFDVAGETFAAHRCVLAARSPVFTAELFGAMKEGHTGGVVRIEDMEP
RAFKALLYFLYTDLLFPKTMATTMNQSEDGDVGGDDEDVLCQHLLVAADKYNLERLKSLCEKKLSECIHVGTVAIILTLA
EQHRCPGLKKVCLHFLRSPANLRAVASSDAFKHLSSSCPSVMVELVAMLGNSA

MAIISPNTGLIAASFAVSPSTFPRRRFVPKPYSLQNAAAPKLKSVNRAPRRRENSNSAGLVRNRRGAAERWSEREIEIIR
FAMSSRAGGGKPLWSASTIVAKVASGYHILRIDGYSRTMETPTGESIASLPFSVGGRCWRIRYYPNGDKLENKEYISLYL
NLHDRSVEAEKAQLMFRFVGDVAEQPLILGRLHTFEKQGWGYAKFIKRKDLEESKHLVDDSFSIRCDVAVRFNDVRVEKA
PEAAAAAAMISVQPSDLHQHLGSLLLTQKGADVVFDVAGETFAAHRCVLAARSPVFTAELFGAMKEGHTGGVVRIEDMEP
RAFKALLYFLYTDLLFPKTMATTMNQSEDGDVGGDDEDVLCQHLLVAADKYNLERLKSLCEKKLSECIHVGTVAIILTLA
EQHRCPGLKKVCLHFLRSPANLRAVASSDAFKHLSSSCPSVMVELVAMLGNSA

MAIISPNTGLIAASFAVSPSTFPRRRFVPKPYSLQNAAAPKLKSVNRAPRRRENSNSAGLVRNRRGAAERWSEREIEIIR
FAMSSRAGGGKPLWSASTIVAKVASGYHILRIDGYSRTMETPTGESIASLPFSVGGRCWRIRYYPNGDKLENKEYISLYL
NLHDRSVEAEKAQLMFRFVGDVAEQPLILGRLHTFEKQGWGYAKFIKRKDLEESKHLVDDSFSIRCDVAVRFNDVRVEKA
PEAAAAAAMISVQPSDLHQHLGSLLLTQKGADVVFDVAGETFAAHRCVLAARSPVFTAELFGAMKEGHTGGVVRIEDMEP
RAFKALLYFLYTDLLFPKTMATTMNQSEDGDVGGDDEDVLCQHLLVAADKYNLERLKSLCEKKLSECIHVGTVAIILTLA
EQHRCPGLKKVCLHFLRSPANLRAVASSDAFKHLSSSCPSVMVELVAMLGNSA

MAIISPNTGLIAASFAVSPSTFPRRRFVPKPYSLQNAAAPKLKSVNRAPRRRENSNSAGLVRNRRGAAERWSEREIEIIR
FAMSSRAGGGKPLWSASTIVAKVASGYHILRIDGYSRTMETPTGESIASLPFSVGGRCWRIRYYPNGDKLENKEYISLYL
NLHDRSVEAEKAQLMFRFVGDVAEQPLILGRLHTFEKQGWGYAKFIKRKDLEESKHLVDDSFSIRCDVAVRFNDVRVEKA
PEAAAAAAMISVQPSDLHQHLGSLLLTQKGADVVFDVAGETFAAHRCVLAARSPVFTAELFGAMKEGHTGGVVRIEDMEP
RAFKALLYFLYTDLLFPKTMATTMNQSEDGDVGGDDEDVLCQHLLVAADKYNLERLKSLCEKKLSECIHVGTVAIILTLA
EQHRCPGLKKVCLHFLRSPANLRAVASSDAFKHLSSSCPSVMVELVAMLGNSA

MAIISPNTGLIAASFAVSPSTFPRRRFVPKPYSLQNAAAPKLKSVNRAPRRRENSNSAGLVRNRRGAAERWSEREIEIIR
FAMSSRAGGGKPLWSASTIVAKVASGYHILRIDGYSRTMETPTGESIASLPFSVGGRCWRIRYYPNGDKLENKEYISLYL
NLHDRSVEAEKAQLMFRFVGDVAEQPLILGRLHTFEKQGWGYAKFIKRKDLEESKHLVDDSFSIRCDVAVRFNDVRVEKA
PEAAAAAAMISVQPSDLHQHLGSLLLTQKGADVVFDVAGETFAAHRCVLAARSPVFTAELFGAMKEGHTGGVVRIEDMEP
RAFKALLYFLYTDLLFPKTMATTMNQSEDGDVGGDDEDVLCQHLLVAADKYNLERLKSLCEKKLSECIHVGTVAIILTLA
EQHRCPGLKKVCLHFLRSPANLRAVASSDAFKHLSSSCPSVMVELVAMLGNSA

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00917
PF00651
PF00651
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Nucleotide Sequence
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TCGGCTGCGTCTCCAAAATAGAGAA...

GRMZM2G077428_T01 from maize genome v3

Amino Acid Sequence
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MISVQPSDLHQHLGSLLLTQKGADVVFDVAGETFAAHRCVLAARSPVFTAELFGAMKEGHTGGVVRIEDMEPRAFKALLY
FLYTDLLFPKTMATTMNQSEDGDVGGDDEDVLCQHLLVAADKYNLERLKSLCEKKLSECIHVGTVAIILTLAEQHRCPGL
KKVCLHFLRSPANLRAVASSDAFKHLSSSCPSVMVELVAMLGNSA

Nucleotide Sequence
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GAACTCGGCAGGACTTGTGCGGAAT...

GRMZM2G077428_T02 from maize genome v3


Related TFome: pUT4809, pUT4614

Amino Acid Sequence
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MSSRAGGGKPLWSASTIVAKVASGYHILRIDGYSRTMETPTGESIASLPFSVGGRCWRIRYYPNGDKLENKEYISLYLNL
HDRSVEAEKAQLMFRFVGDVAEQPLILGRLHTFEKQGWGYAKFIKRKDLEESKHLVDDSFSIRCDVAVRFNDVRVEKAPE
AAAAAAMISVQPSDLHQHLGSLLLTQKGADVVFDVAGETFAAHRCVLAARSPVFTAELFGAMKEGHTGGVVRIEDMEPRA
FKALLYFLYTDLLFPKTMATTMNQSEDGDVGGDDEDVLCQHLLVAADKYNLERLKSLCEKKLSECIHVGTVAIILTLAEQ
HRCPGLKKVCLHFLRSPANLRAVASSDAFKHLSSSCPSVMVELVAMLGNSA

Nucleotide Sequence
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ATCGCCGCCTCCTTCGCCGTTTCGC...

Zm00001d033082_T001 from maize genome v4

Amino Acid Sequence
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MSSRAGGGKPLWSASTIVAKVASGYHILRIDGYSRTMETPTGESIASLPFSVGGRCWRIRYYPNGDKLENKEYISLYLNL
HDRSVEAEKAQLMFRFVGDVAEQPLILGRLHTFEKQGWGYAKFIKRKDLEESKHLVDDSFSIRCDVAVRFNDVRVEKAPE
AAAAAAMISVQPSDLHQHLGSLLLTQKGADVVFDVAGETFAAHRCVLAARSPVFTAELFGAMKEGHTGGVVRIEDMEPRA
FKALLYFLYTDLLFPKTMATTMNQSEDGDVGGDDEDVLCQHLLVAADKYNLERLKSLCEKKLSECIHVGTVAIILTLAEQ
HRCPGLKKVCLHFLRSPANLRAVASSDAFKHLSSSCPSVMVELVAMLGNSA

Nucleotide Sequence
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ATGTCCTCCAGGGCTGGCGGCGGCA...


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